Serialized Form

Package massbalance

Class massbalance.JMassBalance extends JPanel implements Serializable

serialVersionUID:: -3531306005220407446L

Serialized Fields

frame
```
JFrame frame
```
randomize
```
Thread randomize
```
properties
```
Thread properties
```
outputDirLabel
```
JLabel outputDirLabel
```
inputDirLabel
```
JLabel inputDirLabel
```
networkFileField
```
JTextField networkFileField
```
outputDirField
```
JTextField outputDirField
```
nameField
```
JTextField nameField
```
inputDirField
```
JTextField inputDirField
```
networkFileButton
```
JButton networkFileButton
```
outputDirButton
```
JButton outputDirButton
```
nameButton
```
JButton nameButton
```
inputDirButton
```
JButton inputDirButton
```
startButton
```
JButton startButton
```
stopButton
```
JButton stopButton
```
startButton2
```
JButton startButton2
```
stopButton2
```
JButton stopButton2
```
massbalancedButton
```
JRadioButton massbalancedButton
```
switchButton
```
JRadioButton switchButton
```
massbalancedButton2
```
JRadioButton massbalancedButton2
```
switchButton2
```
JRadioButton switchButton2
```
fix
```
JCheckBox fix
```
compartments
```
JCheckBox compartments
```
reversible
```
JCheckBox reversible
```
iterative
```
JCheckBox iterative
```
strict
```
JCheckBox strict
```
fromSpinner
```
JSpinner fromSpinner
```
toSpinner
```
JSpinner toSpinner
```
fromSpinner2
```
JSpinner fromSpinner2
```
toSpinner2
```
JSpinner toSpinner2
```
depthSpinner
```
JSpinner depthSpinner
```
probSpinner
```
JSpinner probSpinner
```
pathLength
```
JCheckBox pathLength
```
clustering
```
JCheckBox clustering
```
assortativity
```
JCheckBox assortativity
```
degrees
```
JCheckBox degrees
```
weights
```
JCheckBox weights
```
scopes
```
JCheckBox scopes
```
nCycles
```
JCheckBox nCycles
```
nCyclesSpinner
```
JSpinner nCyclesSpinner
```
scopesSpinner
```
JSpinner scopesSpinner
```
console
```
JTextArea console
```
randomizeStarted
```
boolean randomizeStarted
```
propertiesStarted
```
boolean propertiesStarted
```

Class massbalance.MetabolicGraph extends org.jgrapht.graph.SimpleDirectedWeightedGraph<Vertex,org.jgrapht.graph.DefaultWeightedEdge> implements Serializable

serialVersionUID:

2925850334894946865L
- Serialized Fields
  - version
```
String version
```
  - reversible
```
boolean reversible
```
  - compartments
```
boolean compartments
```
  - compounds
```
HashMap<K,V> compounds
```
  - reactions
```
HashMap<K,V> reactions
```
  - phosphates
```
HashMap<K,V> phosphates
```
  - hydrogens
```
HashMap<K,V> hydrogens
```
  - visits
```
HashMap<K,V> visits
```
Class massbalance.Vertex extends Object implements Serializable

serialVersionUID:

-2969225075285620605L
- Serialized Fields
  - name
```
String name
```
  - compartment
```
String compartment
```
  - rxnLocation
```
String rxnLocation
```
  - deltaG
```
Double deltaG
```
  - type
```
boolean type
```
  - mass
```
int[] mass
```
  - isReversed
```
boolean isReversed
```
  - reversedReaction
```
Vertex reversedReaction
```

Serialized Form

Package massbalance

Class massbalance.JMassBalance extends JPanel implements Serializable

Serialized Fields

frame

randomize

properties

outputDirLabel

inputDirLabel

networkFileField

outputDirField

nameField

inputDirField

networkFileButton

outputDirButton

nameButton

inputDirButton

startButton

stopButton

startButton2

stopButton2

massbalancedButton

switchButton

massbalancedButton2

switchButton2

fix

compartments

reversible

iterative

strict

fromSpinner

toSpinner

fromSpinner2

toSpinner2

depthSpinner

probSpinner

pathLength

clustering

assortativity

degrees

weights

scopes

nCycles

nCyclesSpinner

scopesSpinner

console

randomizeStarted

propertiesStarted

Class massbalance.MetabolicGraph extends org.jgrapht.graph.SimpleDirectedWeightedGraph<Vertex,org.jgrapht.graph.DefaultWeightedEdge> implements Serializable

Serialized Fields

version

reversible

compartments

compounds

reactions

phosphates

hydrogens

visits

Class massbalance.Vertex extends Object implements Serializable

Serialized Fields

name

compartment

rxnLocation

deltaG

type

mass

isReversed

reversedReaction